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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819788.1_cds_XP_016500181.1_14031
CDS Infomation

[gene=LOC107818653] [db_xref=GeneID:107818653] [protein=putative lipase ROG1 isoform X2] [protein_id=XP_016500181.1] [location=join(53273..53403,54291..54358,55390..55460,55588..55830,57379..57542,57802..57857,57951..58003,58080..58200,58812..58909,61131..61202)] [gbkey=CDS]
Sequence

ATGGAAAACGGAAAAGTAGAGGACGGAGGAGTTTGCTCATCGGAAAGCGTTAACGGCGGC
GAAGATATCTTCAGTTGCCAAAATTCCGATGCTGATCATCTTGTTATTATGGTCCACGGT
ATTCTCGGAAGCGCCACAGACTGGAAGTTTGGTGCTGAGCAGTTTGTTCGGATGCTTCCC
CACAAAGTATTTGTTCATTGTAGTGAACGTAATATGGCAAAACTAACATTGGATGGTGTG
GATGTAATGGCTGAGAGATTGGTTGAGGAGGTTCTTGAAGTGATCAAGAGAAATCCAGGT
CTAAAGAAAATTTCTTTTGTGTCCCATTCTGTTGGAGGGTTGGTGGCAAGATATGCCATT
GGGAGATTATACAGACCTCATAGAATGGAGAATAGGGAGGATTTATTGGCCAATGCATGC
GTAGAAGGGTCAAAGGGTACGATAGCTGGTTTGCAACCAATAAATTTTGTCACTGTTGCC
ACACCTCATCTTGGTTCTAGAGGTAACAAGCAGGTGCCATTTCTTTTTGGTGTAACTGCC
CTAGAGAAAGTTGCTTTTCATGTAATTCATTTGATATTCAAAAGAACAGGGCAGCACCTT
TTTCTTTGTGATAATGATGAAGGGAAGCCTCCATTACTTAAACGCATGGTGGAAGATGAC
GGTGAACTACGCTTCATGTCTGCATTGCGTTCGTTCAAGCGCCGGGTTGCATATTCAAAT
GTTGGCTATGACCATATTGTTGGTTGGAGAACATCATCTATTAGACGTAATAATGAACTA
CCCAAGTGGGAAGACTCCTTGAATGAAAAGTATCCTCACATTGTGTACGAAGAACATTGC
AAGGCATGTGATGGTGAGCAGGGTGAGTCCGTGGTGAAGAAAGATGATTCTTTGGACAAG
ACGGAAGAGGAATTGGTGACTGGTTTATCTAGAGTGTCATGGGACAAAGTAGACGTTAGC
TTTCACAAGAGCAAGCGTAGATTTGCCGCTCACAGTGTTATTCAGGTGAAGGATCAATAT
ATGCATGCCGAAGGTGCTGACGTTATACAACATATGATTGATAATTTTATTGTATAG

Peptide Sequence

PEP ID

XP_016500181.1
PEP Infomation

PREDICTED: putative lipase ROG1 isoform X2 [Nicotiana tabacum]
Sequence

MENGKVEDGGVCSSESVNGGEDIFSCQNSDADHLVIMVHGILGSATDWKFGAEQFVRMLP
HKVFVHCSERNMAKLTLDGVDVMAERLVEEVLEVIKRNPGLKKISFVSHSVGGLVARYAI
GRLYRPHRMENREDLLANACVEGSKGTIAGLQPINFVTVATPHLGSRGNKQVPFLFGVTA
LEKVAFHVIHLIFKRTGQHLFLCDNDEGKPPLLKRMVEDDGELRFMSALRSFKRRVAYSN
VGYDHIVGWRTSSIRRNNELPKWEDSLNEKYPHIVYEEHCKACDGEQGESVVKKDDSLDK
TEEELVTGLSRVSWDKVDVSFHKSKRRFAAHSVIQVKDQYMHAEGADVIQHMIDNFIV

Transcript Sequence

Gene sequence data has not been registered.